TBX6 missense variants expand the mutational spectrum in a non-Mendelian inheritance disease.

TitleTBX6 missense variants expand the mutational spectrum in a non-Mendelian inheritance disease.
Publication TypeJournal Article
Year of Publication2020
AuthorsChen, W, Lin, J, Wang, L, Li, X, Zhao, S, Liu, J, Akdemir, ZC, Zhao, Y, Du, R, Ye, Y, Song, X, Zhang, Y, Yan, Z, Yang, X, Lin, M, Shen, J, Wang, S, Gao, N, Yang, Y, Liu, Y, Li, W, Liu, J, Zhang, N, Yang, X, Xu, Y, Zhang, J, Delgado, MR, Posey, JE, Qiu, G, Rios, JJ, Liu, P, Wise, CA, Zhang, F, Wu, Z, Lupski, JR, Wu, N
JournalHum Mutat
Volume41
Issue1
Pagination182-195
Date Published2020 Jan
ISSN1098-1004
Abstract

Congenital scoliosis (CS) is a birth defect with variable clinical and anatomical manifestations due to spinal malformation. The genetic etiology underlying about 10% of CS cases in the Chinese population is compound inheritance by which the gene dosage is reduced below that of haploinsufficiency. In this genetic model, the trait manifests as a result of the combined effect of a rare variant and common pathogenic variant allele at a locus. From exome sequencing (ES) data of 523 patients in Asia and two patients in Texas, we identified six TBX6 gene-disruptive variants from 11 unrelated CS patients via ES and in vitro functional testing. The in trans mild hypomorphic allele was identified in 10 of the 11 subjects; as anticipated these 10 shared a similar spinal deformity of hemivertebrae. The remaining case has a homozygous variant in TBX6 (c.418C>T) and presents a more severe spinal deformity phenotype. We found decreased transcriptional activity and abnormal cellular localization as the molecular mechanisms for TBX6 missense loss-of-function alleles. Expanding the mutational spectrum of TBX6 pathogenic alleles enabled an increased molecular diagnostic detection rate, provided further evidence for the gene dosage-dependent genetic model underlying CS, and refined clinical classification.

DOI10.1002/humu.23907
Alternate JournalHum. Mutat.
PubMed ID31471994
PubMed Central IDPMC7061259
Grant ListNINDS R35 NS105078 / / US National Institute of Neurological Disorders and Stroke /
/ / Milstein Medical Asian American Partnership Foundation Fellowship Award in Translational Medicine /
NHGRI/NHLBI UM1 HG00654 / / US National Human Genome Research Institute /
P01 HD084387 / HD / NICHD NIH HHS / United States
81972132 / / National Natural Science Foundation of China /
81772301 / / National Natural Science Foundation of China /
UM1 HG006542 / HG / NHGRI NIH HHS / United States
R35 NS105078 / NS / NINDS NIH HHS / United States
K08 HG008986 / HG / NHGRI NIH HHS / United States
81822030 / / National Natural Science Foundation of China /
81672123 / / National Natural Science Foundation of China /
81930068 / / National Natural Science Foundation of China /
7172175 7191007 / / Beijing Natural Science Foundation /
2016 / / Beijing Natural Science Foundation /
NHGRI K08 HG008986 / / US National Human Genome Research Institute /
2018YFC0910506 / / National Key Research and Development Program of China /
2016-I2M-3-003 2016-I2M-2-006 2017-I2M-2-001. / / CAMS Initiative Fund for Medical Sciences /
2018RC31003 / / Central Level Public Interest Program for Scientific Research Institute /
81772299 / / National Natural Science Foundation of China /